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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copA_2Copper transporting P-type ATPase. (737 aa)    
Predicted Functional Partners:
kdpB
Potassium translocating ATPase, subunit B.
 
    
 0.902
csoR
Copper-sensing transcriptional repressor CsoR.
 
  
 0.845
cecC
Chemiosmotic efflux system C protein C.
 
    0.818
CopA_1
Cation transport ATPase.
 
 
0.707
cueO
Multicopper oxidase.
 
  
 0.698
CopA_2
Multicopper oxidase.
 
  
 0.550
copA_1
Copper efflux ATPase.
 
  
 0.544
Lche_2202
Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family.
       0.473
Lche_2200
Metallo-beta lactamase family transporter protein.
  
    0.472
Lche_2201
Thymidine phosphorylase.
       0.472
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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