Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CopA_1 | copA_2 | Lche_2719 | Lche_2198 | Cation transport ATPase. | Copper transporting P-type ATPase. | 0.707 |
CopA_1 | csoR | Lche_2719 | Lche_2199 | Cation transport ATPase. | Copper-sensing transcriptional repressor CsoR. | 0.712 |
CopA_1 | cueO | Lche_2719 | Lche_2193 | Cation transport ATPase. | Multicopper oxidase. | 0.709 |
Lche_2201 | Lche_2202 | Lche_2201 | Lche_2202 | Thymidine phosphorylase. | Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.950 |
Lche_2201 | cecC | Lche_2201 | Lche_2197 | Thymidine phosphorylase. | Chemiosmotic efflux system C protein C. | 0.463 |
Lche_2201 | copA_2 | Lche_2201 | Lche_2198 | Thymidine phosphorylase. | Copper transporting P-type ATPase. | 0.472 |
Lche_2201 | csoR | Lche_2201 | Lche_2199 | Thymidine phosphorylase. | Copper-sensing transcriptional repressor CsoR. | 0.460 |
Lche_2202 | Lche_2201 | Lche_2202 | Lche_2201 | Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family. | Thymidine phosphorylase. | 0.950 |
Lche_2202 | cecC | Lche_2202 | Lche_2197 | Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family. | Chemiosmotic efflux system C protein C. | 0.469 |
Lche_2202 | copA_2 | Lche_2202 | Lche_2198 | Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family. | Copper transporting P-type ATPase. | 0.473 |
Lche_2202 | csoR | Lche_2202 | Lche_2199 | Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family. | Copper-sensing transcriptional repressor CsoR. | 0.519 |
ceaB | cecA_2 | Lche_2196 | Lche_2195 | Chemiosmotic efflux system protein B-like protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Chemiosmotic efflux system protein A-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.962 |
ceaB | cecC | Lche_2196 | Lche_2197 | Chemiosmotic efflux system protein B-like protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Chemiosmotic efflux system C protein C. | 0.750 |
ceaB | copA_2 | Lche_2196 | Lche_2198 | Chemiosmotic efflux system protein B-like protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Copper transporting P-type ATPase. | 0.445 |
ceaB | csoR | Lche_2196 | Lche_2199 | Chemiosmotic efflux system protein B-like protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Copper-sensing transcriptional repressor CsoR. | 0.586 |
ceaB | cueO | Lche_2196 | Lche_2193 | Chemiosmotic efflux system protein B-like protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Multicopper oxidase. | 0.767 |
cecA_2 | ceaB | Lche_2195 | Lche_2196 | Chemiosmotic efflux system protein A-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Chemiosmotic efflux system protein B-like protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.962 |
cecA_2 | cecC | Lche_2195 | Lche_2197 | Chemiosmotic efflux system protein A-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Chemiosmotic efflux system C protein C. | 0.821 |
cecA_2 | copA_2 | Lche_2195 | Lche_2198 | Chemiosmotic efflux system protein A-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Copper transporting P-type ATPase. | 0.453 |
cecA_2 | csoR | Lche_2195 | Lche_2199 | Chemiosmotic efflux system protein A-like protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Copper-sensing transcriptional repressor CsoR. | 0.481 |
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