Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lche_1448 | Lche_2200 | Lche_1448 | Lche_2200 | Naringenin-chalcone synthase. | Metallo-beta lactamase family transporter protein. | 0.627 |
Lche_1448 | rpoB | Lche_1448 | Lche_3380 | Naringenin-chalcone synthase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.680 |
Lche_1601 | Lche_2200 | Lche_1601 | Lche_2200 | Naringenin-chalcone synthase. | Metallo-beta lactamase family transporter protein. | 0.627 |
Lche_1601 | rpoB | Lche_1601 | Lche_3380 | Naringenin-chalcone synthase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.680 |
Lche_2200 | Lche_1448 | Lche_2200 | Lche_1448 | Metallo-beta lactamase family transporter protein. | Naringenin-chalcone synthase. | 0.627 |
Lche_2200 | Lche_1601 | Lche_2200 | Lche_1601 | Metallo-beta lactamase family transporter protein. | Naringenin-chalcone synthase. | 0.627 |
Lche_2200 | Lche_2201 | Lche_2200 | Lche_2201 | Metallo-beta lactamase family transporter protein. | Thymidine phosphorylase. | 0.848 |
Lche_2200 | Lche_2202 | Lche_2200 | Lche_2202 | Metallo-beta lactamase family transporter protein. | Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.813 |
Lche_2200 | apaH | Lche_2200 | Lche_2837 | Metallo-beta lactamase family transporter protein. | Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.745 |
Lche_2200 | gpmI | Lche_2200 | Lche_0721 | Metallo-beta lactamase family transporter protein. | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family. | 0.744 |
Lche_2200 | ligD | Lche_2200 | Lche_2925 | Metallo-beta lactamase family transporter protein. | DNA ligase D. | 0.645 |
Lche_2200 | polA | Lche_2200 | Lche_3025 | Metallo-beta lactamase family transporter protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.742 |
Lche_2200 | rpoB | Lche_2200 | Lche_3380 | Metallo-beta lactamase family transporter protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.626 |
Lche_2200 | yjeA | Lche_2200 | Lche_0965 | Metallo-beta lactamase family transporter protein. | Endo-1,4-beta-xylanase. | 0.911 |
Lche_2201 | Lche_2200 | Lche_2201 | Lche_2200 | Thymidine phosphorylase. | Metallo-beta lactamase family transporter protein. | 0.848 |
Lche_2201 | Lche_2202 | Lche_2201 | Lche_2202 | Thymidine phosphorylase. | Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.950 |
Lche_2202 | Lche_2200 | Lche_2202 | Lche_2200 | Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family. | Metallo-beta lactamase family transporter protein. | 0.813 |
Lche_2202 | Lche_2201 | Lche_2202 | Lche_2201 | Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family. | Thymidine phosphorylase. | 0.950 |
apaH | Lche_2200 | Lche_2837 | Lche_2200 | Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | Metallo-beta lactamase family transporter protein. | 0.745 |
apaH | polA | Lche_2837 | Lche_3025 | Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.532 |
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