Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cfa_2 | Lche_0616 | Lche_2221 | Lche_0616 | Cyclopropane-fatty-acyl-phospholipid synthase. | Amine oxidase, flavin containing. | 0.754 |
Cfa_2 | Lche_2219 | Lche_2221 | Lche_2219 | Cyclopropane-fatty-acyl-phospholipid synthase. | Flavin containing amine oxidoreductase. | 0.995 |
Cfa_2 | Lche_2220 | Lche_2221 | Lche_2220 | Cyclopropane-fatty-acyl-phospholipid synthase. | Hypothetical protein. | 0.987 |
Cfa_2 | Lche_2222 | Lche_2221 | Lche_2222 | Cyclopropane-fatty-acyl-phospholipid synthase. | Hypothetical protein. | 0.798 |
Cfa_2 | Lche_2223 | Lche_2221 | Lche_2223 | Cyclopropane-fatty-acyl-phospholipid synthase. | 3-oxo-5-alpha-steroid 4-dehydrogenase. | 0.930 |
Lche_0616 | Cfa_2 | Lche_0616 | Lche_2221 | Amine oxidase, flavin containing. | Cyclopropane-fatty-acyl-phospholipid synthase. | 0.754 |
Lche_0616 | Lche_2219 | Lche_0616 | Lche_2219 | Amine oxidase, flavin containing. | Flavin containing amine oxidoreductase. | 0.774 |
Lche_0616 | Lche_2220 | Lche_0616 | Lche_2220 | Amine oxidase, flavin containing. | Hypothetical protein. | 0.819 |
Lche_0616 | Lche_2223 | Lche_0616 | Lche_2223 | Amine oxidase, flavin containing. | 3-oxo-5-alpha-steroid 4-dehydrogenase. | 0.696 |
Lche_0616 | Lche_3145 | Lche_0616 | Lche_3145 | Amine oxidase, flavin containing. | Deoxyribodipyrimidine photolyase-related protein. | 0.461 |
Lche_0616 | cfa | Lche_0616 | Lche_2970 | Amine oxidase, flavin containing. | Cyclopropane fatty acyl phospholipid synthase. | 0.443 |
Lche_2219 | Cfa_2 | Lche_2219 | Lche_2221 | Flavin containing amine oxidoreductase. | Cyclopropane-fatty-acyl-phospholipid synthase. | 0.995 |
Lche_2219 | Lche_0616 | Lche_2219 | Lche_0616 | Flavin containing amine oxidoreductase. | Amine oxidase, flavin containing. | 0.774 |
Lche_2219 | Lche_2220 | Lche_2219 | Lche_2220 | Flavin containing amine oxidoreductase. | Hypothetical protein. | 0.961 |
Lche_2219 | Lche_2222 | Lche_2219 | Lche_2222 | Flavin containing amine oxidoreductase. | Hypothetical protein. | 0.825 |
Lche_2219 | Lche_2223 | Lche_2219 | Lche_2223 | Flavin containing amine oxidoreductase. | 3-oxo-5-alpha-steroid 4-dehydrogenase. | 0.948 |
Lche_2219 | Lche_3145 | Lche_2219 | Lche_3145 | Flavin containing amine oxidoreductase. | Deoxyribodipyrimidine photolyase-related protein. | 0.522 |
Lche_2219 | PhrB | Lche_2219 | Lche_3142 | Flavin containing amine oxidoreductase. | Deoxyribodipyrimidine photolyase phrB; Belongs to the DNA photolyase family. | 0.474 |
Lche_2219 | cfa | Lche_2219 | Lche_2970 | Flavin containing amine oxidoreductase. | Cyclopropane fatty acyl phospholipid synthase. | 0.953 |
Lche_2219 | ctaG | Lche_2219 | Lche_2814 | Flavin containing amine oxidoreductase. | Cytochrome c oxidase assembly protein. | 0.875 |
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