STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IcfACarbonic anhydrase. (354 aa)    
Predicted Functional Partners:
Lche_0950
Inorganic transporter and to carbonic anhydrase (bi-functional).
 
 
0.932
YchM
Sulfate transporter.
 
  
 0.918
CynT
Carbonic anhydrase.
  
  
 
0.911
Lche_3135
Hypothetical protein; Belongs to the UPF0753 family.
  
    0.612
Cph2_7
Regulatory protein (GGDEF, PAS, PAC domains).
  
    0.505
TycA
Peptide synthetase, non-ribosomal.
 
 
 
 0.493
Lche_2260
Putative virulence protein.
       0.472
YrdA
Transferase.
    
 
 0.410
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.