Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ChiD | Lche_0524 | Lche_2313 | Lche_0524 | Chitinase. | Dihydroorotate dehydrogenase electron transfer subunit. | 0.804 |
ChiD | Lche_0535 | Lche_2313 | Lche_0535 | Chitinase. | Hypothetical protein. | 0.758 |
ChiD | Lche_0544 | Lche_2313 | Lche_0544 | Chitinase. | Calcium-transporting ATPase. | 0.762 |
ChiD | Lche_1158 | Lche_2313 | Lche_1158 | Chitinase. | Hypothetical protein. | 0.759 |
ChiD | Lche_2120 | Lche_2313 | Lche_2120 | Chitinase. | Major facilitator family transporter. | 0.756 |
ChiD | Lche_2621 | Lche_2313 | Lche_2621 | Chitinase. | Hypothetical protein. | 0.758 |
ChiD | Lche_2888 | Lche_2313 | Lche_2888 | Chitinase. | Transmembrane protein (fibronectin III domain and Gp5 C-terminal repeat). | 0.857 |
ChiD | Lche_3036 | Lche_2313 | Lche_3036 | Chitinase. | Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.872 |
ChiD | chiA | Lche_2313 | Lche_2293 | Chitinase. | Chitinase A precursor. | 0.914 |
ChiD | chiA1 | Lche_2313 | Lche_2665 | Chitinase. | Chitinase A1 precursor; Belongs to the glycosyl hydrolase 18 family. | 0.779 |
Lche_0524 | ChiD | Lche_0524 | Lche_2313 | Dihydroorotate dehydrogenase electron transfer subunit. | Chitinase. | 0.804 |
Lche_0524 | Lche_0535 | Lche_0524 | Lche_0535 | Dihydroorotate dehydrogenase electron transfer subunit. | Hypothetical protein. | 0.777 |
Lche_0524 | Lche_0544 | Lche_0524 | Lche_0544 | Dihydroorotate dehydrogenase electron transfer subunit. | Calcium-transporting ATPase. | 0.575 |
Lche_0524 | Lche_2120 | Lche_0524 | Lche_2120 | Dihydroorotate dehydrogenase electron transfer subunit. | Major facilitator family transporter. | 0.472 |
Lche_0524 | Lche_2888 | Lche_0524 | Lche_2888 | Dihydroorotate dehydrogenase electron transfer subunit. | Transmembrane protein (fibronectin III domain and Gp5 C-terminal repeat). | 0.715 |
Lche_0524 | Lche_3036 | Lche_0524 | Lche_3036 | Dihydroorotate dehydrogenase electron transfer subunit. | Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.428 |
Lche_0535 | ChiD | Lche_0535 | Lche_2313 | Hypothetical protein. | Chitinase. | 0.758 |
Lche_0535 | Lche_0524 | Lche_0535 | Lche_0524 | Hypothetical protein. | Dihydroorotate dehydrogenase electron transfer subunit. | 0.777 |
Lche_0535 | Lche_0544 | Lche_0535 | Lche_0544 | Hypothetical protein. | Calcium-transporting ATPase. | 0.467 |
Lche_0535 | Lche_2120 | Lche_0535 | Lche_2120 | Hypothetical protein. | Major facilitator family transporter. | 0.423 |
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