Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ChiD | NixA | Lche_2313 | Lche_2314 | Chitinase. | High-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family. | 0.483 |
| ChiD | hypA | Lche_2313 | Lche_2315 | Chitinase. | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.475 |
| ChiD | hypB | Lche_2313 | Lche_2316 | Chitinase. | Hydrogenase expression/formation protein HypB. | 0.475 |
| ChiD | hypF | Lche_2313 | Lche_2317 | Chitinase. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.486 |
| HoxH_2 | HoxY | Lche_2324 | Lche_2323 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Sulfhydrogenase subunit delta. | 0.999 |
| HoxH_2 | hypA | Lche_2324 | Lche_2315 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.431 |
| HoxH_2 | hypB | Lche_2324 | Lche_2316 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase expression/formation protein HypB. | 0.440 |
| HoxH_2 | hypC | Lche_2324 | Lche_2318 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase expression/formation protein HypC. | 0.638 |
| HoxH_2 | hypD | Lche_2324 | Lche_2319 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase expression/formation protein HypD; Belongs to the HypD family. | 0.726 |
| HoxH_2 | hypE | Lche_2324 | Lche_2320 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase expression/formation protein HypE. | 0.724 |
| HoxH_2 | hypF | Lche_2324 | Lche_2317 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.680 |
| HoxH_2 | vhtD | Lche_2324 | Lche_2325 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase expression/formation protein. | 0.965 |
| HoxY | HoxH_2 | Lche_2323 | Lche_2324 | Sulfhydrogenase subunit delta. | Coenzyme F420-reducing hydrogenase, alpha subunit. | 0.999 |
| HoxY | hypB | Lche_2323 | Lche_2316 | Sulfhydrogenase subunit delta. | Hydrogenase expression/formation protein HypB. | 0.440 |
| HoxY | hypC | Lche_2323 | Lche_2318 | Sulfhydrogenase subunit delta. | Hydrogenase expression/formation protein HypC. | 0.590 |
| HoxY | hypD | Lche_2323 | Lche_2319 | Sulfhydrogenase subunit delta. | Hydrogenase expression/formation protein HypD; Belongs to the HypD family. | 0.620 |
| HoxY | hypE | Lche_2323 | Lche_2320 | Sulfhydrogenase subunit delta. | Hydrogenase expression/formation protein HypE. | 0.638 |
| HoxY | hypF | Lche_2323 | Lche_2317 | Sulfhydrogenase subunit delta. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.554 |
| HoxY | vhtD | Lche_2323 | Lche_2325 | Sulfhydrogenase subunit delta. | Hydrogenase expression/formation protein. | 0.969 |
| NixA | ChiD | Lche_2314 | Lche_2313 | High-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family. | Chitinase. | 0.483 |
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