STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frmAAlcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (369 aa)    
Predicted Functional Partners:
frmC
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.999
AdhT
Alcohol dehydrogenase.
  
 
0.937
YahK_1
Zinc-type alcohol dehydrogenase-like protein.
    
0.931
AldA
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.918
ywdH
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.918
Pdc
Pyruvate decarboxylase.
   
 
 0.918
AlkB2
Alkane monooxygenase.
    
 0.903
Mdh_2
Alcohol dehydrogenase.
   
 
 0.897
csoR
Copper-sensing transcriptional repressor CsoR.
  
  
 0.811
Lche_2365
Alpha/beta hydrolase.
  
  
 0.610
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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