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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phaB_3Acetyoacetyl CoA reductase. (251 aa)    
Predicted Functional Partners:
yvfE_2
Cell wall biosynthesis regulatory pyridoxal phosphate-dependent protein; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.786
Lche_0219
O-methyltransferase.
 
  
   0.680
Lche_2366
Hypothetical protein.
       0.661
Lche_2506
acyl-CoA synthetase.
  
 
 0.545
pksJ_1
Polyketide synthase, type I.
  
 
 0.512
Lche_1834
acyl-CoA synthetase.
  
 
 0.512
Lche_2715
acyl-CoA synthetase.
  
 
 0.512
CsgA_2
Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.510
Lche_2365
Alpha/beta hydrolase.
   
   0.443
PhoK
Alkaline phosphatase.
   
 
 0.428
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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