STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TyrP_1Tyrosine-specific transport protein. (162 aa)    
Predicted Functional Partners:
Lche_0636
Protein IcmB (DotO).
  
     0.634
enhA_2
Enhanced entry protein EnhA.
  
     0.601
Lche_0635
IcmJ protein.
  
     0.594
aacA4
Aminoglycoside N(6')acetyltransferase.
  
     0.592
Lche_1183
Integral membrane protein (PIN domain superfamily).
  
     0.573
Lche_0629
Protein IcmL (DotI).
  
     0.568
Lche_0626
Protein IcmO (DotL).
  
     0.567
dotC
Defect in organelle trafficking lipoprotein DotC.
  
     0.543
TyrP_2
Tyrosine-specific transport protein.
 
    
0.540
kup-2
Low affinity potassium transport system protein Kup; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.
       0.496
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.