STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lche_2435GNAT family acetyltransferase. (156 aa)    
Predicted Functional Partners:
traE
Type IV conjugative transfer system protein TraE.
  
     0.529
cocE
Cocaine esterase.
       0.505
yjbJ
Stress response protein; Belongs to the UPF0337 (CsbD) family.
       0.469
Lche_3129
GNAT family acetyltransferase.
 
  
 0.447
fosA
Glutathione transferase fosA (Fosfomycin resistance protein).
 
     0.442
Lche_2437
Beta-lactamase.
 
     0.425
Lche_2433
PRC-barrel domain protein.
       0.415
Lche_2432
Hypothetical protein.
       0.409
Lche_2977
Methyltransferase, ubiE/COQ5 family.
 
     0.402
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.