Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CynT | IcfA | Lche_2456 | Lche_2259 | Carbonic anhydrase. | Carbonic anhydrase. | 0.911 |
CynT | Lche_0950 | Lche_2456 | Lche_0950 | Carbonic anhydrase. | Inorganic transporter and to carbonic anhydrase (bi-functional). | 0.924 |
CynT | Lche_2455 | Lche_2456 | Lche_2455 | Carbonic anhydrase. | Heat shock protein, Hsp20 family; Belongs to the small heat shock protein (HSP20) family. | 0.549 |
CynT | Lche_3135 | Lche_2456 | Lche_3135 | Carbonic anhydrase. | Hypothetical protein; Belongs to the UPF0753 family. | 0.534 |
CynT | TycA | Lche_2456 | Lche_0431 | Carbonic anhydrase. | Peptide synthetase, non-ribosomal. | 0.484 |
CynT | YrdA | Lche_2456 | Lche_2528 | Carbonic anhydrase. | Transferase. | 0.418 |
IcfA | CynT | Lche_2259 | Lche_2456 | Carbonic anhydrase. | Carbonic anhydrase. | 0.911 |
IcfA | Lche_0950 | Lche_2259 | Lche_0950 | Carbonic anhydrase. | Inorganic transporter and to carbonic anhydrase (bi-functional). | 0.933 |
IcfA | Lche_3135 | Lche_2259 | Lche_3135 | Carbonic anhydrase. | Hypothetical protein; Belongs to the UPF0753 family. | 0.534 |
IcfA | TycA | Lche_2259 | Lche_0431 | Carbonic anhydrase. | Peptide synthetase, non-ribosomal. | 0.491 |
IcfA | YrdA | Lche_2259 | Lche_2528 | Carbonic anhydrase. | Transferase. | 0.418 |
Lche_0950 | CynT | Lche_0950 | Lche_2456 | Inorganic transporter and to carbonic anhydrase (bi-functional). | Carbonic anhydrase. | 0.924 |
Lche_0950 | IcfA | Lche_0950 | Lche_2259 | Inorganic transporter and to carbonic anhydrase (bi-functional). | Carbonic anhydrase. | 0.933 |
Lche_0950 | Lche_3135 | Lche_0950 | Lche_3135 | Inorganic transporter and to carbonic anhydrase (bi-functional). | Hypothetical protein; Belongs to the UPF0753 family. | 0.597 |
Lche_0950 | TycA | Lche_0950 | Lche_0431 | Inorganic transporter and to carbonic anhydrase (bi-functional). | Peptide synthetase, non-ribosomal. | 0.700 |
Lche_0950 | YrdA | Lche_0950 | Lche_2528 | Inorganic transporter and to carbonic anhydrase (bi-functional). | Transferase. | 0.460 |
Lche_2455 | CynT | Lche_2455 | Lche_2456 | Heat shock protein, Hsp20 family; Belongs to the small heat shock protein (HSP20) family. | Carbonic anhydrase. | 0.549 |
Lche_3135 | CynT | Lche_3135 | Lche_2456 | Hypothetical protein; Belongs to the UPF0753 family. | Carbonic anhydrase. | 0.534 |
Lche_3135 | IcfA | Lche_3135 | Lche_2259 | Hypothetical protein; Belongs to the UPF0753 family. | Carbonic anhydrase. | 0.534 |
Lche_3135 | Lche_0950 | Lche_3135 | Lche_0950 | Hypothetical protein; Belongs to the UPF0753 family. | Inorganic transporter and to carbonic anhydrase (bi-functional). | 0.597 |
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