STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ArnTDolichyl-phosphate-mannose-protein mannosyltransferase. (506 aa)    
Predicted Functional Partners:
YfdH
Bactoprenol glucosyl transferase.
 
  
 0.915
Lche_0918
Glycosyltransferase.
  
  
 0.680
UhpC_2
Major facilitator family transporter.
       0.672
Lche_0517
GtrA-like protein.
 
  
 0.631
Lche_0512
Cellobiose phosphorylase.
 
  
 0.539
UhpC_3
Major facilitator family transporter.
       0.506
deoB
Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
       0.500
Lche_2476
Substrate of the Dot/Icm secretion system.
       0.458
pagP
Antimicrobial peptide resistance and Lipid A acylation protein PagP; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.
  
   
 0.458
Lche_2477
Polysaccharide deacetylase domain-containing protein.
  
    0.409
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.