STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FimTType IV pre-pilin. (174 aa)    
Predicted Functional Partners:
PilX
Tfp pilus assembly protein PilX.
 
  
 0.993
Lche_2480
Tfp pilus assembly protein PilW.
 
  
 0.986
Lche_2479
Pre-pilin leader sequence (pilV).
 
  
 0.984
Lche_2482
Type 4 fimbrial biogenesis protein PilY1.
 
  
 0.962
pilE_2
Type-IV pilin.
 
  
 0.950
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
 
   
 0.837
pilN
Tfp pilus assembly protein PilN.
 
  
 0.781
pilP
Tfp pilus assembly protein PilP.
  
  
 0.770
pilC
Pilus assembly protein PilC.
 
  
 0.755
pilO
Tfp pilus assembly protein PilO.
 
  
 0.720
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.