Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ats | Lche_2581 | Lche_2582 | Lche_2581 | Acetyltransferase (GNAT) family protein. | Dot/Icm secretion system substrate. | 0.450 |
Ats | Lche_2583 | Lche_2582 | Lche_2583 | Acetyltransferase (GNAT) family protein. | Cupin domain protein. | 0.710 |
Ats | MetG_2 | Lche_2582 | Lche_2585 | Acetyltransferase (GNAT) family protein. | methionyl-tRNA synthetase. | 0.714 |
Ats | iucD | Lche_2582 | Lche_2584 | Acetyltransferase (GNAT) family protein. | L-lysine N6-monooxygenase. | 0.698 |
Lche_2581 | Ats | Lche_2581 | Lche_2582 | Dot/Icm secretion system substrate. | Acetyltransferase (GNAT) family protein. | 0.450 |
Lche_2581 | Lche_2583 | Lche_2581 | Lche_2583 | Dot/Icm secretion system substrate. | Cupin domain protein. | 0.403 |
Lche_2581 | MetG_2 | Lche_2581 | Lche_2585 | Dot/Icm secretion system substrate. | methionyl-tRNA synthetase. | 0.403 |
Lche_2581 | iucD | Lche_2581 | Lche_2584 | Dot/Icm secretion system substrate. | L-lysine N6-monooxygenase. | 0.403 |
Lche_2583 | Ats | Lche_2583 | Lche_2582 | Cupin domain protein. | Acetyltransferase (GNAT) family protein. | 0.710 |
Lche_2583 | Lche_2581 | Lche_2583 | Lche_2581 | Cupin domain protein. | Dot/Icm secretion system substrate. | 0.403 |
Lche_2583 | MetG_2 | Lche_2583 | Lche_2585 | Cupin domain protein. | methionyl-tRNA synthetase. | 0.800 |
Lche_2583 | iucD | Lche_2583 | Lche_2584 | Cupin domain protein. | L-lysine N6-monooxygenase. | 0.800 |
MetG_2 | Ats | Lche_2585 | Lche_2582 | methionyl-tRNA synthetase. | Acetyltransferase (GNAT) family protein. | 0.714 |
MetG_2 | Lche_2581 | Lche_2585 | Lche_2581 | methionyl-tRNA synthetase. | Dot/Icm secretion system substrate. | 0.403 |
MetG_2 | Lche_2583 | Lche_2585 | Lche_2583 | methionyl-tRNA synthetase. | Cupin domain protein. | 0.800 |
MetG_2 | iucD | Lche_2585 | Lche_2584 | methionyl-tRNA synthetase. | L-lysine N6-monooxygenase. | 0.800 |
iucD | Ats | Lche_2584 | Lche_2582 | L-lysine N6-monooxygenase. | Acetyltransferase (GNAT) family protein. | 0.698 |
iucD | Lche_2581 | Lche_2584 | Lche_2581 | L-lysine N6-monooxygenase. | Dot/Icm secretion system substrate. | 0.403 |
iucD | Lche_2583 | Lche_2584 | Lche_2583 | L-lysine N6-monooxygenase. | Cupin domain protein. | 0.800 |
iucD | MetG_2 | Lche_2584 | Lche_2585 | L-lysine N6-monooxygenase. | methionyl-tRNA synthetase. | 0.800 |