Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AprX | Lche_0377 | Lche_2723 | Lche_0377 | Subtilisin-like serine protease. | CAAX amino terminal protease self- immunity. | 0.714 |
AprX | Lche_0530 | Lche_2723 | Lche_0530 | Subtilisin-like serine protease. | Hypothetical protein. | 0.722 |
AprX | Lche_1836 | Lche_2723 | Lche_1836 | Subtilisin-like serine protease. | Hypothetical protein. | 0.761 |
AprX | Lche_2327 | Lche_2723 | Lche_2327 | Subtilisin-like serine protease. | Coiled-coil protein. | 0.608 |
AprX | Lche_2611 | Lche_2723 | Lche_2611 | Subtilisin-like serine protease. | Hypothetical protein. | 0.623 |
AprX | ProQ_1 | Lche_2723 | Lche_3075 | Subtilisin-like serine protease. | ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.542 |
AprX | SecA_2 | Lche_2723 | Lche_1911 | Subtilisin-like serine protease. | Coiled-coil protein. | 0.779 |
AprX | ankK | Lche_2723 | Lche_0250 | Subtilisin-like serine protease. | Substrate of the Dot/Icm secretion system. | 0.784 |
AprX | iraA | Lche_2723 | Lche_2094 | Subtilisin-like serine protease. | Small-molecule methyltransferase IraA. | 0.763 |
Lche_0377 | AprX | Lche_0377 | Lche_2723 | CAAX amino terminal protease self- immunity. | Subtilisin-like serine protease. | 0.714 |
Lche_0377 | Lche_0530 | Lche_0377 | Lche_0530 | CAAX amino terminal protease self- immunity. | Hypothetical protein. | 0.756 |
Lche_0377 | Lche_1836 | Lche_0377 | Lche_1836 | CAAX amino terminal protease self- immunity. | Hypothetical protein. | 0.760 |
Lche_0377 | Lche_2327 | Lche_0377 | Lche_2327 | CAAX amino terminal protease self- immunity. | Coiled-coil protein. | 0.573 |
Lche_0377 | Lche_2611 | Lche_0377 | Lche_2611 | CAAX amino terminal protease self- immunity. | Hypothetical protein. | 0.718 |
Lche_0377 | ProQ_1 | Lche_0377 | Lche_3075 | CAAX amino terminal protease self- immunity. | ProQ; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.521 |
Lche_0377 | SecA_2 | Lche_0377 | Lche_1911 | CAAX amino terminal protease self- immunity. | Coiled-coil protein. | 0.769 |
Lche_0377 | ankK | Lche_0377 | Lche_0250 | CAAX amino terminal protease self- immunity. | Substrate of the Dot/Icm secretion system. | 0.763 |
Lche_0377 | iraA | Lche_0377 | Lche_2094 | CAAX amino terminal protease self- immunity. | Small-molecule methyltransferase IraA. | 0.767 |
Lche_0530 | AprX | Lche_0530 | Lche_2723 | Hypothetical protein. | Subtilisin-like serine protease. | 0.722 |
Lche_0530 | Lche_0377 | Lche_0530 | Lche_0377 | Hypothetical protein. | CAAX amino terminal protease self- immunity. | 0.756 |
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