STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_2647Type VI secretion lipoprotein. (204 aa)    
Predicted Functional Partners:
Lche_2648
Hypothetical protein.
  
  
 0.904
Lche_2649
Hypothetical protein.
  
  
 0.901
Lche_2651
Hypothetical protein; ImpA-related N-terminal.
  
  
 0.642
Lche_2639
Hypothetical protein.
  
  
 0.613
Lche_2650
Hypothetical protein.
  
  
 0.613
Lche_2640
Hypothetical protein.
  
  
 0.534
Lche_2643
Hypothetical protein.
  
  
 0.517
Lche_2642
Hypothetical protein.
  
  
 0.505
Lche_0483
IcmH (DotU).
  
  
 0.454
Lche_2644
Hypothetical protein.
  
  
 0.411
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.