STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iolGMyo-inositol 2-dehydrogenase. (338 aa)    
Predicted Functional Partners:
iolE
Myo-inositol catabolism protein iolE.
 
 
 0.998
iolD
Malonic semialdehyde oxidative decarboxylase; Belongs to the TPP enzyme family.
 
  
 0.988
iolCB
IolC/IolB transferase kinase protein.
 
  
 0.981
suhB
Inositol monophosphatase.
    
 0.917
GalP
Sugar-proton symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
    0.782
Lche_2712
Hypothetical protein.
       0.723
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.693
Lche_2715
acyl-CoA synthetase.
  
  
 0.627
wecB
UDP-N-acetylglucosamine 2-epimerase.
  
  
 0.600
BtrR
Aminotransferase WecE; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.587
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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