Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Est | Lche_0631 | Lche_2770 | Lche_0631 | Lipase. | Protein IcmE (DotG). | 0.401 |
Est | Lche_1692 | Lche_2770 | Lche_1692 | Lipase. | Hypothetical protein. | 0.449 |
Est | Lche_2064 | Lche_2770 | Lche_2064 | Lipase. | Protein-tyrosine phosphatase. | 0.487 |
Est | Lche_2153 | Lche_2770 | Lche_2153 | Lipase. | Protein LvrA. | 0.491 |
Est | Lche_2769 | Lche_2770 | Lche_2769 | Lipase. | Coiled-coil protein. | 0.559 |
Est | dotA | Lche_2770 | Lche_0416 | Lipase. | Defect in organelle trafficking protein DotA. | 0.470 |
Est | lidP | Lche_2770 | Lche_3014 | Lipase. | Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. | 0.640 |
Lche_0631 | Est | Lche_0631 | Lche_2770 | Protein IcmE (DotG). | Lipase. | 0.401 |
Lche_0631 | Lche_1692 | Lche_0631 | Lche_1692 | Protein IcmE (DotG). | Hypothetical protein. | 0.691 |
Lche_0631 | Lche_2064 | Lche_0631 | Lche_2064 | Protein IcmE (DotG). | Protein-tyrosine phosphatase. | 0.728 |
Lche_0631 | Lche_2153 | Lche_0631 | Lche_2153 | Protein IcmE (DotG). | Protein LvrA. | 0.776 |
Lche_0631 | dotA | Lche_0631 | Lche_0416 | Protein IcmE (DotG). | Defect in organelle trafficking protein DotA. | 0.778 |
Lche_1692 | Est | Lche_1692 | Lche_2770 | Hypothetical protein. | Lipase. | 0.449 |
Lche_1692 | Lche_0631 | Lche_1692 | Lche_0631 | Hypothetical protein. | Protein IcmE (DotG). | 0.691 |
Lche_1692 | Lche_2064 | Lche_1692 | Lche_2064 | Hypothetical protein. | Protein-tyrosine phosphatase. | 0.725 |
Lche_1692 | Lche_2153 | Lche_1692 | Lche_2153 | Hypothetical protein. | Protein LvrA. | 0.769 |
Lche_1692 | dotA | Lche_1692 | Lche_0416 | Hypothetical protein. | Defect in organelle trafficking protein DotA. | 0.744 |
Lche_2064 | Est | Lche_2064 | Lche_2770 | Protein-tyrosine phosphatase. | Lipase. | 0.487 |
Lche_2064 | Lche_0631 | Lche_2064 | Lche_0631 | Protein-tyrosine phosphatase. | Protein IcmE (DotG). | 0.728 |
Lche_2064 | Lche_1692 | Lche_2064 | Lche_1692 | Protein-tyrosine phosphatase. | Hypothetical protein. | 0.725 |
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