Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lche_2799ATPase MoxR. (333 aa)    
Predicted Functional Partners:
Lche_2800
Hypothetical protein.
 
  
 0.951
Lche_2802
Hypothetical protein.
 
  
 0.938
Lche_2803
Hypothetical protein.
 
     0.930
Lche_2801
Hypothetical protein.
 
  
 0.914
Lche_2804
TPR repeat containing protein.
 
     0.914
Lche_2805
KQDN repeat-containing protein.
 
  
 0.910
cadA_1
Lysine decarboxylase, inducible.
   
 
 0.757
Lche_2798
Hypothetical protein.
       0.543
NylA
Amidase; Belongs to the amidase family.
     
 0.502
Dus
tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
  
    0.428
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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