STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_2802Hypothetical protein. (342 aa)    
Predicted Functional Partners:
Lche_2803
Hypothetical protein.
   
0.967
Lche_2800
Hypothetical protein.
 
  
 0.966
Lche_2804
TPR repeat containing protein.
   
 0.965
Lche_2805
KQDN repeat-containing protein.
 
   
 0.965
Lche_2801
Hypothetical protein.
 
    0.962
Lche_2799
ATPase MoxR.
 
  
 0.938
Lche_2798
Hypothetical protein.
       0.635
NylA
Amidase; Belongs to the amidase family.
  
    0.497
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.