Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ArcB_1 | Cph2_4 | Lche_2876 | Lche_0286 | Sensory box histidine kinase/response regulator. | Regulatory protein (GGDEF and EAL domains). | 0.997 |
ArcB_1 | Cph2_5 | Lche_2876 | Lche_0798 | Sensory box histidine kinase/response regulator. | Regulatory protein (GGDEF and EAL domains). | 0.997 |
ArcB_1 | DosC | Lche_2876 | Lche_2948 | Sensory box histidine kinase/response regulator. | Regulatory protein (GGDEF domain). | 0.874 |
ArcB_1 | Gmr_3 | Lche_2876 | Lche_1926 | Sensory box histidine kinase/response regulator. | Regulatory protein (GGDEF domain). | 0.998 |
ArcB_1 | LuxQ_2 | Lche_2876 | Lche_2382 | Sensory box histidine kinase/response regulator. | Sensory histidine-kinase / response regulator. | 0.997 |
ArcB_1 | RpfG_1 | Lche_2876 | Lche_0542 | Sensory box histidine kinase/response regulator. | Sensory protein (PAS domain). | 0.534 |
ArcB_1 | RpfG_2 | Lche_2876 | Lche_1664 | Sensory box histidine kinase/response regulator. | Metal dependent phosphohydrolase. | 0.501 |
ArcB_1 | YcgG_1 | Lche_2876 | Lche_2677 | Sensory box histidine kinase/response regulator. | Signal transduction protein (EAL/GGDEF domain protein). | 0.762 |
ArcB_1 | YcgG_2 | Lche_2876 | Lche_1681 | Sensory box histidine kinase/response regulator. | Regulatory protein (EAL domain). | 0.770 |
ArcB_1 | letS | Lche_2876 | Lche_1945 | Sensory box histidine kinase/response regulator. | Legionella transmission sensor LetS. | 0.982 |
Cph2_4 | ArcB_1 | Lche_0286 | Lche_2876 | Regulatory protein (GGDEF and EAL domains). | Sensory box histidine kinase/response regulator. | 0.997 |
Cph2_4 | Cph2_5 | Lche_0286 | Lche_0798 | Regulatory protein (GGDEF and EAL domains). | Regulatory protein (GGDEF and EAL domains). | 0.982 |
Cph2_4 | DosC | Lche_0286 | Lche_2948 | Regulatory protein (GGDEF and EAL domains). | Regulatory protein (GGDEF domain). | 0.963 |
Cph2_4 | Gmr_3 | Lche_0286 | Lche_1926 | Regulatory protein (GGDEF and EAL domains). | Regulatory protein (GGDEF domain). | 0.982 |
Cph2_4 | LuxQ_2 | Lche_0286 | Lche_2382 | Regulatory protein (GGDEF and EAL domains). | Sensory histidine-kinase / response regulator. | 0.997 |
Cph2_4 | RpfG_1 | Lche_0286 | Lche_0542 | Regulatory protein (GGDEF and EAL domains). | Sensory protein (PAS domain). | 0.808 |
Cph2_4 | RpfG_2 | Lche_0286 | Lche_1664 | Regulatory protein (GGDEF and EAL domains). | Metal dependent phosphohydrolase. | 0.825 |
Cph2_4 | YcgG_1 | Lche_0286 | Lche_2677 | Regulatory protein (GGDEF and EAL domains). | Signal transduction protein (EAL/GGDEF domain protein). | 0.672 |
Cph2_4 | YcgG_2 | Lche_0286 | Lche_1681 | Regulatory protein (GGDEF and EAL domains). | Regulatory protein (EAL domain). | 0.673 |
Cph2_4 | letS | Lche_0286 | Lche_1945 | Regulatory protein (GGDEF and EAL domains). | Legionella transmission sensor LetS. | 0.968 |
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