STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lche_3031Hypothetical protein. (268 aa)    
Predicted Functional Partners:
VipF
Hypothetical protein; N-terminal GNAT family acetyltransferase.
       0.748
Lche_3032
Hypothetical protein.
       0.721
Lche_1665
Rho GTPase (Miro-like).
  
     0.512
yicO
Xanthine/uracil permease.
       0.496
arp_2
Ankyrin repeat protein.
  
     0.495
Lche_1932
Ectonucleoside triphosphate diphosphohydrolase.
  
     0.492
fabF-2
3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.469
Lche_3057
Ras family GTPase.
  
     0.467
Lche_2252
Carrier protein.
  
     0.421
traA_2
Conjugal transfer protein TraA.
  
     0.419
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.