Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GpmA | McrA | Lche_3038 | Lche_3037 | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | FAD linked oxidase. | 0.649 |
GpmA | YsdC_1 | Lche_3038 | Lche_3040 | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | Endo-1,4-beta-glucanase. | 0.548 |
GpmA | kdsB | Lche_3038 | Lche_3039 | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 3-deoxy-manno-octulosonate cytidylyltransferase; Belongs to the KdsB family. | 0.835 |
McrA | GpmA | Lche_3037 | Lche_3038 | FAD linked oxidase. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.649 |
McrA | YsdC_1 | Lche_3037 | Lche_3040 | FAD linked oxidase. | Endo-1,4-beta-glucanase. | 0.413 |
McrA | kdsB | Lche_3037 | Lche_3039 | FAD linked oxidase. | 3-deoxy-manno-octulosonate cytidylyltransferase; Belongs to the KdsB family. | 0.636 |
YsdC_1 | GpmA | Lche_3040 | Lche_3038 | Endo-1,4-beta-glucanase. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.548 |
YsdC_1 | McrA | Lche_3040 | Lche_3037 | Endo-1,4-beta-glucanase. | FAD linked oxidase. | 0.413 |
YsdC_1 | kdsB | Lche_3040 | Lche_3039 | Endo-1,4-beta-glucanase. | 3-deoxy-manno-octulosonate cytidylyltransferase; Belongs to the KdsB family. | 0.548 |
kdsB | GpmA | Lche_3039 | Lche_3038 | 3-deoxy-manno-octulosonate cytidylyltransferase; Belongs to the KdsB family. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.835 |
kdsB | McrA | Lche_3039 | Lche_3037 | 3-deoxy-manno-octulosonate cytidylyltransferase; Belongs to the KdsB family. | FAD linked oxidase. | 0.636 |
kdsB | YsdC_1 | Lche_3039 | Lche_3040 | 3-deoxy-manno-octulosonate cytidylyltransferase; Belongs to the KdsB family. | Endo-1,4-beta-glucanase. | 0.548 |