Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CheA | CheR | Lche_3043 | Lche_3046 | Chemotaxis histidine kinase. | Methyltransferase involved in chemotaxis (CheR domain). | 0.996 |
CheA | CheW_1 | Lche_3043 | Lche_3047 | Chemotaxis histidine kinase. | Chemotaxis signal transduction protein (cheW domain). | 0.999 |
CheA | CheW_2 | Lche_3043 | Lche_3045 | Chemotaxis histidine kinase. | Chemotaxis signal transduction protein (cheW domain). | 0.999 |
CheA | Cph2_4 | Lche_3043 | Lche_0286 | Chemotaxis histidine kinase. | Regulatory protein (GGDEF and EAL domains). | 0.843 |
CheA | Cph2_5 | Lche_3043 | Lche_0798 | Chemotaxis histidine kinase. | Regulatory protein (GGDEF and EAL domains). | 0.843 |
CheA | CyaB_1 | Lche_3043 | Lche_3041 | Chemotaxis histidine kinase. | Guanylate/adenylate cyclase. | 0.993 |
CheA | Gmr_3 | Lche_3043 | Lche_1926 | Chemotaxis histidine kinase. | Regulatory protein (GGDEF domain). | 0.980 |
CheA | Lche_0814 | Lche_3043 | Lche_0814 | Chemotaxis histidine kinase. | CheW-like domain protein. | 0.723 |
CheA | Tsr | Lche_3043 | Lche_3044 | Chemotaxis histidine kinase. | Chemotaxis signal transducer. | 0.998 |
CheA | cheB | Lche_3043 | Lche_3042 | Chemotaxis histidine kinase. | Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
CheR | CheA | Lche_3046 | Lche_3043 | Methyltransferase involved in chemotaxis (CheR domain). | Chemotaxis histidine kinase. | 0.996 |
CheR | CheW_1 | Lche_3046 | Lche_3047 | Methyltransferase involved in chemotaxis (CheR domain). | Chemotaxis signal transduction protein (cheW domain). | 0.988 |
CheR | CheW_2 | Lche_3046 | Lche_3045 | Methyltransferase involved in chemotaxis (CheR domain). | Chemotaxis signal transduction protein (cheW domain). | 0.982 |
CheR | Cph2_4 | Lche_3046 | Lche_0286 | Methyltransferase involved in chemotaxis (CheR domain). | Regulatory protein (GGDEF and EAL domains). | 0.407 |
CheR | CyaB_1 | Lche_3046 | Lche_3041 | Methyltransferase involved in chemotaxis (CheR domain). | Guanylate/adenylate cyclase. | 0.892 |
CheR | Gmr_3 | Lche_3046 | Lche_1926 | Methyltransferase involved in chemotaxis (CheR domain). | Regulatory protein (GGDEF domain). | 0.836 |
CheR | Lche_0814 | Lche_3046 | Lche_0814 | Methyltransferase involved in chemotaxis (CheR domain). | CheW-like domain protein. | 0.897 |
CheR | Tsr | Lche_3046 | Lche_3044 | Methyltransferase involved in chemotaxis (CheR domain). | Chemotaxis signal transducer. | 0.968 |
CheR | cheB | Lche_3046 | Lche_3042 | Methyltransferase involved in chemotaxis (CheR domain). | Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.997 |
CheW_1 | CheA | Lche_3047 | Lche_3043 | Chemotaxis signal transduction protein (cheW domain). | Chemotaxis histidine kinase. | 0.999 |
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