Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lche_0107 | Lche_3087 | Lche_0107 | Lche_3087 | GTP cyclohydrolase. | Hypothetical protein. | 0.493 |
| Lche_0107 | tgt | Lche_0107 | Lche_0017 | GTP cyclohydrolase. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.462 |
| Lche_3086 | Lche_3087 | Lche_3086 | Lche_3087 | HTH-type transcriptional regulator. | Hypothetical protein. | 0.517 |
| Lche_3086 | Lche_3089 | Lche_3086 | Lche_3089 | HTH-type transcriptional regulator. | Putative Methyltransferase. | 0.760 |
| Lche_3087 | Lche_0107 | Lche_3087 | Lche_0107 | Hypothetical protein. | GTP cyclohydrolase. | 0.493 |
| Lche_3087 | Lche_3086 | Lche_3087 | Lche_3086 | Hypothetical protein. | HTH-type transcriptional regulator. | 0.517 |
| Lche_3087 | Lche_3088 | Lche_3087 | Lche_3088 | Hypothetical protein. | Hypothetical protein. | 0.760 |
| Lche_3087 | Lche_3089 | Lche_3087 | Lche_3089 | Hypothetical protein. | Putative Methyltransferase. | 0.824 |
| Lche_3087 | queF | Lche_3087 | Lche_3345 | Hypothetical protein. | GTP cyclohydrolase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). | 0.493 |
| Lche_3087 | tgt | Lche_3087 | Lche_0017 | Hypothetical protein. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.454 |
| Lche_3088 | Lche_3087 | Lche_3088 | Lche_3087 | Hypothetical protein. | Hypothetical protein. | 0.760 |
| Lche_3088 | Lche_3089 | Lche_3088 | Lche_3089 | Hypothetical protein. | Putative Methyltransferase. | 0.796 |
| Lche_3089 | Lche_3086 | Lche_3089 | Lche_3086 | Putative Methyltransferase. | HTH-type transcriptional regulator. | 0.760 |
| Lche_3089 | Lche_3087 | Lche_3089 | Lche_3087 | Putative Methyltransferase. | Hypothetical protein. | 0.824 |
| Lche_3089 | Lche_3088 | Lche_3089 | Lche_3088 | Putative Methyltransferase. | Hypothetical protein. | 0.796 |
| queF | Lche_3087 | Lche_3345 | Lche_3087 | GTP cyclohydrolase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). | Hypothetical protein. | 0.493 |
| queF | tgt | Lche_3345 | Lche_0017 | GTP cyclohydrolase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.467 |
| tgt | Lche_0107 | Lche_0017 | Lche_0107 | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | GTP cyclohydrolase. | 0.462 |
| tgt | Lche_3087 | Lche_0017 | Lche_3087 | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | Hypothetical protein. | 0.454 |
| tgt | queF | Lche_0017 | Lche_3345 | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | GTP cyclohydrolase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). | 0.467 |