STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_3098Hypothetical protein. (250 aa)    
Predicted Functional Partners:
Lche_3097
Hypothetical protein.
 
 
 0.999
Lche_3100
Hypothetical protein.
 
 
 0.992
Lche_3099
Hypothetical protein.
  
  
 0.979
Lche_0631
Protein IcmE (DotG).
 
 
 0.961
lvhB_6
Vir protein.
 
  
 0.961
Lche_3095
Hypothetical protein.
 
   
 0.959
Lche_3096
Hypothetical protein; Part of the Type IV secretion system. Belongs to the GSP E family.
 
   
 0.940
lvhB3
Type IV secretion system protein VirB3.
  
  
 0.930
lvrD
Legionella vir region protein.
       0.800
Lche_3094
Hypothetical protein.
       0.778
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.