Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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Score
Lche_3121Taurine catabolism dioxygenase TauD, TfdA family. (326 aa)    
Predicted Functional Partners:
novR
Decarboxylase NovR.
 
     0.855
Lche_2506
acyl-CoA synthetase.
  
  
 0.650
Lche_0351
5-carboxyvanillate decarboxylase.
  
     0.597
Lche_0359
Glyoxalase/bleomycin resistance protein.
  
    0.563
Lche_3179
FAD monooxygenase.
  
     0.546
thi
Thiamine biosynthesis protein NMT-1.
 
    0.498
Lche_0521
Saframycin Mx1 synthetase B.
  
  
 0.478
Efe
Iron/ascorbate oxidoreductase family protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
    0.457
McrA
FAD linked oxidase.
  
    0.447
YecD
Isochorismatase.
  
    0.442
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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