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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_3129GNAT family acetyltransferase. (162 aa)    
Predicted Functional Partners:
Lche_1616
GNAT family acetyltransferase.
  
     0.771
Lche_0073
GNAT family acetyltransferase.
  
     0.673
Lche_2914
N-acetyltransferase GCN5.
 
     0.566
Lche_0117
Methyltransferase.
  
     0.500
Lche_1287
Uridine kinase.
 
      0.488
Lche_2977
Methyltransferase, ubiE/COQ5 family.
  
     0.468
Lche_0118
GNAT family acetyltransferase.
 
     0.447
Lche_2435
GNAT family acetyltransferase.
 
  
 0.445
Lche_1139
Substrate of the Dot/Icm secretion system.
  
     0.440
fosA
Glutathione transferase fosA (Fosfomycin resistance protein).
  
    0.438
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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