Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lche_3134Nitrogen regulatory protein P-II. (122 aa)    
Predicted Functional Partners:
Lche_3135
Hypothetical protein; Belongs to the UPF0753 family.
 
     0.941
Lche_3133
Hypothetical protein.
 
     0.878
NuoL_2
NADH-ubiquinone oxidoreductase chain 5.
 
   
 0.857
purK
Phosphoribosylaminoimidazole carboxylase ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
 
     0.790
GltR
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
  
 0.702
purE-2
Phosphoribosylaminoimidazole carboxylase, catalytic subunit PurE; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.693
Lche_3140
Outer membrane component of multidrug efflux pump.
 
    0.605
Lche_0168
Putative conjugative transfer protein TraI.
  
     0.574
Lche_0108
D12 class N6 adenine-specific DNA methyltransferase.
  
     0.569
Lche_1117
Choline kinase.
  
     0.520
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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