close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_3140Outer membrane component of multidrug efflux pump. (471 aa)    
Predicted Functional Partners:
CvaA
Putative membrane fusion protein.
 
   0.968
LagD
Toxin secretion ABC transporter ATP-binding protein.
 
  
 0.962
GltR
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
    0.754
Lche_0095
Ankyrin repeats (3 copies).
  
     0.751
Lche_2974
Hypothetical protein.
  
     0.736
Lche_3133
Hypothetical protein.
 
     0.693
Lche_0077
Putative secreted esterase.
  
   
 0.683
Lche_1392
Adenosine deaminase.
  
     0.683
Lche_2250
NHL repeat protein.
  
  
 0.673
Lche_0168
Putative conjugative transfer protein TraI.
  
     0.664
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.