Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lche_1488 | spo | Lche_1488 | Lche_3203 | 3'-nucleotidase/nuclease. | SpoVR family protein. | 0.497 |
Lche_3204 | Lche_3205 | Lche_3204 | Lche_3205 | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | Serine protein kinase. | 0.993 |
Lche_3204 | YbeZ_1 | Lche_3204 | Lche_2767 | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | PhoH protein. | 0.499 |
Lche_3204 | pepN_2 | Lche_3204 | Lche_3206 | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | Aminopeptidase. | 0.407 |
Lche_3204 | spo | Lche_3204 | Lche_3203 | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | SpoVR family protein. | 0.996 |
Lche_3205 | Lche_3204 | Lche_3205 | Lche_3204 | Serine protein kinase. | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | 0.993 |
Lche_3205 | Ldh | Lche_3205 | Lche_0218 | Serine protein kinase. | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.518 |
Lche_3205 | YbeZ_1 | Lche_3205 | Lche_2767 | Serine protein kinase. | PhoH protein. | 0.521 |
Lche_3205 | pepN_2 | Lche_3205 | Lche_3206 | Serine protein kinase. | Aminopeptidase. | 0.545 |
Lche_3205 | spo | Lche_3205 | Lche_3203 | Serine protein kinase. | SpoVR family protein. | 0.994 |
Ldh | Lche_3205 | Lche_0218 | Lche_3205 | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Serine protein kinase. | 0.518 |
Ldh | spo | Lche_0218 | Lche_3203 | Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | SpoVR family protein. | 0.586 |
YbeZ_1 | Lche_3204 | Lche_2767 | Lche_3204 | PhoH protein. | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | 0.499 |
YbeZ_1 | Lche_3205 | Lche_2767 | Lche_3205 | PhoH protein. | Serine protein kinase. | 0.521 |
YbeZ_1 | spo | Lche_2767 | Lche_3203 | PhoH protein. | SpoVR family protein. | 0.424 |
pepN_2 | Lche_3204 | Lche_3206 | Lche_3204 | Aminopeptidase. | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | 0.407 |
pepN_2 | Lche_3205 | Lche_3206 | Lche_3205 | Aminopeptidase. | Serine protein kinase. | 0.545 |
pepN_2 | spo | Lche_3206 | Lche_3203 | Aminopeptidase. | SpoVR family protein. | 0.407 |
spo | Lche_1488 | Lche_3203 | Lche_1488 | SpoVR family protein. | 3'-nucleotidase/nuclease. | 0.497 |
spo | Lche_3204 | Lche_3203 | Lche_3204 | SpoVR family protein. | Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family. | 0.996 |
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