STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lche_3205Serine protein kinase. (643 aa)    
Predicted Functional Partners:
spo
SpoVR family protein.
 
  
 0.994
Lche_3204
Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family.
 
  
 0.993
Lche_1566
Oxidoreductase,aldo/keto reductase family.
   
    0.628
Lche_2126
D-xylose reductase III.
   
    0.628
katA
Catalase.
   
  
 0.608
wrbA
Flavoprotein WrbA (Trp repressor binding protein); Belongs to the WrbA family.
   
    0.589
MrgA_1
DNA-binding protein; Belongs to the Dps family.
   
    0.573
MrgA_2
Ferritin; Belongs to the Dps family.
   
    0.573
pepN_2
Aminopeptidase.
       0.545
YbeZ_1
PhoH protein.
   
  
 0.521
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.