STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
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[Homology]
Score
LvrOxidoreductase, short-chain dehydrogenase/reductase. (249 aa)    
Predicted Functional Partners:
yueD_3
Sepiapterin reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.754
pksJ_1
Polyketide synthase, type I.
  
 0.557
Lche_1834
acyl-CoA synthetase.
  
 0.557
Lche_2715
acyl-CoA synthetase.
  
 0.557
Lche_3278
Glyoxalase-like domain protein.
  
   0.552
Lche_3279
Hypothetical protein.
       0.519
CsgA_2
Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.498
Lche_0219
O-methyltransferase.
 
  
   0.491
Lche_2506
acyl-CoA synthetase.
  
 
 0.469
Lche_0521
Saframycin Mx1 synthetase B.
  
 
 0.423
Your Current Organism:
Legionella cherrii
NCBI taxonomy Id: 28084
Other names: ATCC 35252, CCUG 29666, CIP 103842, DSM 19213, L. cherrii, Legionella cherryi, NCTC 11976, strain ORW
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