STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydhCMajor facilitator superfamily (MFS) transporter. (380 aa)    
Predicted Functional Partners:
tycC_2
Non-ribosomal peptide synthase.
  
 
 0.549
Lcin_3028
D12 class N6 adenine-specific DNA methyltransferase.
  
     0.529
pheA_2
Chorismate mutase.
   
 
 0.482
Lcin_1236
GNAT family acetyltransferase.
  
     0.469
phaB_1
Acetyoacetyl CoA reductase.
       0.435
Lcin_0156
Putative aminoglycoside phosphotransferase.
  
     0.424
Lcin_0152
Protein kinase domain protein.
  
     0.406
traI_3
Putative conjugative transfer protein TraI.
  
     0.404
aas
Fused 2-acylglycerophospho-ethanolamine acyl transferase, acyl-acyl carrier protein synthetase.
   
 
  0.403
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.