STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_0076Hypothetical protein. (423 aa)    
Predicted Functional Partners:
Lcin_0077
Hypothetical protein.
 
    
0.840
Lcin_0078
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.615
Lcin_1507
TfuA-like protein.
 
  
 0.520
Lcin_2643
Hypothetical protein.
 
  
 0.517
Lcin_1506
Putative conserved hypothetical proteins.
  
     0.489
Lcin_2532
Nitroreductase.
  
  
 0.447
drgA
Nitroreductase.
  
  
 0.447
tauD_2
Taurine catabolism dioxygenase TauD.
  
     0.434
Lcin_1297
Pyoverdine biosynthesis regulatory protein SyrP-like protein.
  
     0.432
ybhS
ABC transporter permease.
  
  
 0.414
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.