STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_0126ecoKI restriction-modification system protein HsdS. (420 aa)    
Predicted Functional Partners:
hsdM_1
Putative type I restriction enzyme M protein.
 
 
 0.995
hsdR_1
Type-1 restriction system, restriction subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.979
Lcin_0124
Zinc metalloprotease.
 
     0.947
hsdM_2
Putative type I restriction enzyme M protein.
 
 
 0.945
Lcin_2047
Zinc metalloprotease.
 
     0.774
Lcin_0129
Phage repressor.
       0.744
Lcin_0128
Hypothetical protein.
       0.741
hsdR_2
Putative type I restriction enzyme R protein.
 
  
 0.706
Lcin_1462
Hypothetical protein.
   
    0.590
lvrA
Protein LvrA.
       0.496
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.