close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_0163GNAT family acetyltransferase. (286 aa)    
Predicted Functional Partners:
grpB_1
Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
 
     0.794
Lcin_3028
D12 class N6 adenine-specific DNA methyltransferase.
  
     0.770
Lcin_0402
Hypothetical protein.
  
     0.769
traI_3
Putative conjugative transfer protein TraI.
  
     0.767
noc
Nucleoid occlusion protein; Belongs to the ParB family.
  
     0.764
Lcin_0156
Putative aminoglycoside phosphotransferase.
  
     0.763
Lcin_0957
Ankyrin repeat protein.
  
     0.759
Lcin_1497
Initiator Replication protein.
  
     0.759
Lcin_0152
Protein kinase domain protein.
  
     0.756
Lcin_1525
Putative sex pilus assembly and mating pair protein TraG.
  
     0.754
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.