pilB protein (Legionella cincinnatiensis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Experiments

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[Homology]

Score

pilB

Pilus assembly protein PilB. (566 aa)

Predicted Functional Partners:

pilC

0.997

lspF

0.988

pilD

0.977

Lcin_3199

0.898

pilQ

0.870

pilM

0.859

pilN

0.814

lspG

0.806

pilZ_1

0.805

pilO

0.752

Your Current Organism:

Legionella cincinnatiensis

NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lcin_3199	lspG	Lcin_3199	Lcin_0392	General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	Type II secretory pathway protein LspG.	0.457
Lcin_3199	pilB	Lcin_3199	Lcin_0252	General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	Pilus assembly protein PilB.	0.898
Lcin_3199	pilM	Lcin_3199	Lcin_1391	General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	Tfp pilus assembly protein, ATPase PilM.	0.606
Lcin_3199	pilN	Lcin_3199	Lcin_1392	General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	Tfp pilus assembly protein PilN.	0.585
lspF	lspG	Lcin_0391	Lcin_0392	Type II secretory pathway protein LspF.	Type II secretory pathway protein LspG.	0.981
lspF	pilB	Lcin_0391	Lcin_0252	Type II secretory pathway protein LspF.	Pilus assembly protein PilB.	0.988
lspF	pilD	Lcin_0391	Lcin_0254	Type II secretory pathway protein LspF.	Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	0.945
lspF	pilM	Lcin_0391	Lcin_1391	Type II secretory pathway protein LspF.	Tfp pilus assembly protein, ATPase PilM.	0.699
lspF	pilN	Lcin_0391	Lcin_1392	Type II secretory pathway protein LspF.	Tfp pilus assembly protein PilN.	0.699
lspF	pilO	Lcin_0391	Lcin_1393	Type II secretory pathway protein LspF.	Tfp pilus assembly protein PilO.	0.699
lspF	pilQ	Lcin_0391	Lcin_1395	Type II secretory pathway protein LspF.	Type IV pilus (Tfp) assembly protein PilQ.	0.771
lspG	Lcin_3199	Lcin_0392	Lcin_3199	Type II secretory pathway protein LspG.	General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	0.457
lspG	lspF	Lcin_0392	Lcin_0391	Type II secretory pathway protein LspG.	Type II secretory pathway protein LspF.	0.981
lspG	pilB	Lcin_0392	Lcin_0252	Type II secretory pathway protein LspG.	Pilus assembly protein PilB.	0.806
lspG	pilC	Lcin_0392	Lcin_0253	Type II secretory pathway protein LspG.	Pilus assembly protein PilC.	0.730
lspG	pilD	Lcin_0392	Lcin_0254	Type II secretory pathway protein LspG.	Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	0.844
pilB	Lcin_3199	Lcin_0252	Lcin_3199	Pilus assembly protein PilB.	General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.	0.898
pilB	lspF	Lcin_0252	Lcin_0391	Pilus assembly protein PilB.	Type II secretory pathway protein LspF.	0.988
pilB	lspG	Lcin_0252	Lcin_0392	Pilus assembly protein PilB.	Type II secretory pathway protein LspG.	0.806
pilB	pilC	Lcin_0252	Lcin_0253	Pilus assembly protein PilB.	Pilus assembly protein PilC.	0.997