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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilCPilus assembly protein PilC. (407 aa)    
Predicted Functional Partners:
pilB
Pilus assembly protein PilB.
 
 
 0.997
pilD
Type 4 prepilin-like proteins leader peptide processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.975
lspE
Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.962
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
 
 
 
 0.903
pilM
Tfp pilus assembly protein, ATPase PilM.
 
 
 
 0.898
pilO
Tfp pilus assembly protein PilO.
 
 
 
 0.804
yggR
Transporter.
 
   
 0.793
pilN
Tfp pilus assembly protein PilN.
 
 
 
 0.791
pilP
Tfp pilus assembly protein PilP.
  
 
 
 0.786
yggR_1
DotB.
 
   
 0.785
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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