STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lcin_02733-deoxy-D-manno-octulosonic-acid kinase. (530 aa)    
Predicted Functional Partners:
gmr_2
Sensory box/GGDEF domain protein.
  
  
 0.838
Lcin_0492
Protein phosphatase 2C.
  
 0.801
evgS_2
Sensor histidine kinase.
    
 0.783
Lcin_2419
Dihydroorotate dehydrogenase electron transfer subunit.
  
     0.771
Lcin_1005
Glycosyl hydrolase family 18; Belongs to the glycosyl hydrolase 18 family.
  
     0.767
Lcin_0508
Hypothetical protein.
  
     0.766
dsbG
NHL repeat protein.
  
     0.759
Lcin_1503
Putative Glutathione synthetase ATP-binding domain-like protein.
  
     0.759
sseJ_1
Phospholipase/lecithinase/hemolysin.
  
     0.743
Lcin_2966
Regulatory protein, SyrP-like protein.
  
     0.741
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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