close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lysR_4LysR family transporter transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
gltC_2
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.724
hcaR
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.667
Lcin_0078
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.659
cynR_1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.629
Lcin_0432
Cupin domain protein.
  
    0.551
gltC_1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.514
oxyR
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.494
lysR_1
LysR family transporter transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.489
cynR_3
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.460
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.