STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yibHHemolysin D. (331 aa)    
Predicted Functional Partners:
yeeA_1
Inner membrane protein.
 
 
 0.888
emrB_2
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
  
 0.842
emrB_3
Multidrug resistance protein, MFS superfamily.
  
  0.840
emrB_1
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
  
 0.838
oprM
Outer membrane efflux protein.
 
  0.820
hsrA
Multidrug efflux protein.
  
 0.710
mdtP
Outer membrane efflux lipoprotein.
  
  0.657
hlyB
ABC transporter.
   
  0.643
SunT
Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
   
  0.643
oprM_4
Outer membrane efflux protein.
 
  0.640
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.