Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
eptA_2Sulfatase. (549 aa)    
Predicted Functional Partners:
ttgC_6
Multidrug efflux MFS outer membrane protein.
       0.678
macA_2
Hemolysin D.
       0.678
Lcin_0516
FtsX-like permease family protein.
       0.678
lolD_2-2
ABC transporter ATP binding protein.
       0.661
eptA_1
Sulfatase.
  
  
 
0.629
arnT
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
 
 0.608
pagP
Antimicrobial peptide resistance and Lipid A acylation protein PagP; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.
     
 0.560
waaM
Lipid A biosynthesis acyltransferase.
     
 0.522
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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