Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wzmABC transporter of LPS O-antigen, Wzm. (273 aa)    
Predicted Functional Partners:
tagH
ABC transporter of LPS O-antigen.
 
 0.999
kfoC
Glycosyl transferase, family 2.
 
  
 0.979
Lcin_0519
Chromosome segregation protein.
 
  
 0.896
wbbL
Putative glycosyl transferase.
 
  
 0.828
cpsB
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.718
yadG
Transporter subunit: ATP-binding component of ABC superfamily protein.
    
 0.624
yadH
Transporter subunit: membrane component of ABC superfamily protein.
    
  0.563
Lcin_0516
FtsX-like permease family protein.
 
     0.556
ugpA
Sn-glycerol-3-phosphate transport system permease protein UgpA.
     
  0.547
ugpE
Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
     
  0.544
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.