Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
tagHABC transporter of LPS O-antigen. (436 aa)    
Predicted Functional Partners:
wzm
ABC transporter of LPS O-antigen, Wzm.
 
 0.999
kfoC
Glycosyl transferase, family 2.
 
  
 0.978
Lcin_0519
Chromosome segregation protein.
 
 
 0.968
cpsB
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.762
wbbL
Putative glycosyl transferase.
 
 
 0.695
comF
Competence protein ComF.
   
    0.647
yadG
Transporter subunit: ATP-binding component of ABC superfamily protein.
     
  0.550
ugpB
Glycerol-3-phosphate-binding periplasmic protein precursor.
     
  0.499
ugpE
Sn-glycerol-3-phosphate transport system permease protein UgpE; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
     
  0.473
hyaD
Glycosyl transferase, family 2.
 
  
 0.441
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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