Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lcin_0523Oxidoreductase. (251 aa)    
Predicted Functional Partners:
dprE1_2
Oxidoreductase.
 
  
  0.963
Lcin_0521
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
 
    0.947
tycC_2
Non-ribosomal peptide synthase.
  
 0.920
rkpA
Type I polyketide synthase WcbR.
  
 0.850
dprE1_1
Hypothetical protein.
 
  
  0.845
Lcin_0524
Transmembrane protein.
 
 
   0.793
Lcin_1849
acyl-CoA synthetase.
  
 0.785
Lcin_1445
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
 
    0.774
pksM
Polyketide synthase.
  
 0.764
Lcin_0503
Saframycin Mx1 synthetase B.
   
 0.726
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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