STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phhAPhenylalanine-4-hydroxylase. (272 aa)    
Predicted Functional Partners:
Lcin_2164
Pterin-4-alpha-carbinolamine dehydratase.
  
 0.947
lly
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.916
hmgA
Homogentisate 1,2-dioxygenase.
 
  
 0.896
Lcin_1911
Glutathione S-transferase (maleylacetoacetate isomerase).
 
  
 0.766
pheA_2
Chorismate mutase.
     
 0.752
Lcin_1912
Fumarylacetoacetate hydrolase.
 
  
 0.681
ddc
Pyridoxal-dependent decarboxylase.
    
 0.660
ldh
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
  0.631
Lcin_0444
NHL repeat protein.
  
  
  0.618
hutH
Histidine ammonia-lyase (Histidase).
   
 
 0.609
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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