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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
artJ_1Arginine ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. (244 aa)    
Predicted Functional Partners:
yecS
Transporter subunit: permease component of ABC superfamily transporter.
 
 0.905
glnQ
ABC transporter ATP-binding protein.
 
 0.859
arcB_4
Sensory box histidine kinase/response regulator.
   
 0.761
arcB_1
Sensory histidine-kinase / response regulator.
   
 0.761
gmr_3
Regulatory protein (GGDEF domain).
    
 0.737
evgS_2
Sensor histidine kinase.
   
 0.735
pheA_2
Chorismate mutase.
     
 0.724
letS
Legionella transmission sensor LetS.
   
 0.693
cheA
Chemotaxis histidine kinase.
    
  0.658
luxQ
Sensor histidine kinase.
    
 0.587
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.