STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yieFChromate reductase, Class I, flavoprotein. (186 aa)    
Predicted Functional Partners:
thi
Thiamine biosynthesis protein NMT-1.
  
 
 0.790
ribF
Riboflavin biosynthesis protein RibF (riboflavin kinase/FMN adenylyltransferase); Belongs to the ribF family.
    
 0.712
abcT3
ABC transporter ATP binding protein.
  
 
 0.663
yfkM
Intracellular protease, ThiJ/PfpI family.
    
 0.602
yjjG
Haloacid dehalogenase.
  
 
  0.575
kshA
Rieske 2Fe-2S domain protein.
     
 0.567
Lcin_0432
Cupin domain protein.
    
  0.556
fumC
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
    
 0.536
ribE
Riboflavin synthase alpha chain.
   
 
  0.531
Lcin_2532
Nitroreductase.
     
 0.520
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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