STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yieFChromate reductase, Class I, flavoprotein. (186 aa)    
Predicted Functional Partners:
ribF
Riboflavin biosynthesis protein RibF (riboflavin kinase/FMN adenylyltransferase); Belongs to the ribF family.
    
  0.712
thi
Thiamine biosynthesis protein NMT-1.
  
 
 0.644
xylA
Xylene monooxygenase.
     
  0.598
abcT3
ABC transporter ATP binding protein.
  
 
 0.551
yusO
Transcriptional regulator, MarR family.
    
 0.487
copA_2
Multicopper oxidase.
      
 0.473
yfkM
Intracellular protease, ThiJ/PfpI family.
    
 0.473
Lcin_2532
Nitroreductase.
     
 0.470
Lcin_2643
Hypothetical protein.
     
 0.470
drgA
Nitroreductase.
     
 0.470
Your Current Organism:
Legionella cincinnatiensis
NCBI taxonomy Id: 28085
Other names: ATCC 43753, CCUG 31230 A, CIP 103875, DSM 19233, L. cincinnatiensis, NCTC 12438, strain 72-OH-H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.